empty names in input

[s-will]

thanks to Paul Klemm:

RNAalifold, locarna

SOURCE of error : fasta with an empty genename

-> RNAalifold throws malloc error

-> locarna ignores gene with empty name

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RNAalifold

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(generated the example.aln with 'clustalw2 example.fasta -CLUSTERING=UPGMA')

$ RNAalifold example.aln

RNAalifold(96372,0x7fffb166b380) malloc: *** error for object 0x7ff24c501cb0: pointer being freed was not allocated
*** set a breakpoint in malloc_error_break to debug
Abort trap: 6

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mlocarna

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ignores the gene with empty name '>' since it cannot create a file with name ''