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@BirolLab

Birol Lab

Bioinformatics Technology Lab

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  1. arcs arcs Public

    🌈Scaffold genome sequence assemblies using linked or long read sequencing data

    C++ 95 14

  2. biobloom biobloom Public

    Create Bloom filters for a given reference and then use it to categorize sequences

    C++ 76 16

  3. LINKS LINKS Public

    ⛓ Long Interval Nucleotide K-mer Scaffolder

    Perl 73 16

  4. tigmint tigmint Public

    ⛓ Correct misassemblies using linked AND long reads

    Python 63 13

  5. LongStitch LongStitch Public

    🪡Correct and scaffold assemblies using long reads

    Makefile 57 8

  6. HLAminer HLAminer Public

    ⛏ HLA predictions from NGS shotgun data

    Perl 55 15

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