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polyAsite_workflow
polyAsite_workflow PublicPipeline for the processing of 3' end sequencing libraries
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PAQR_KAPAC
PAQR_KAPAC Publicscripts, pipelines and documentation to run PAQR and KAPAC; KAPAC allows to infer regulatory sequence motifs implicated in 3’ end processing changes; PAQR enables the quantification of poly(A) site…
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Repositories
- CellType_PolyASite_Atlas Public
This repository is dedicated to the update of PolyASite Atlas to v4.0 with cell-type-level quantification of PAS usage
zavolanlab/CellType_PolyASite_Atlas’s past year of commit activity - nanoflowz Public
This repository contains a set of workflows and tools for processing and analysis of ONT RNA long-read sequencing data
zavolanlab/nanoflowz’s past year of commit activity - ONT_seq_PAIP1_Hondele Public
This repository contains the computational workflows and downstream analysis notebooks related to the polyA tail length changes linked to PAIP1 perturbations, conducted by the lab of Prof. Maria Hondele.
zavolanlab/ONT_seq_PAIP1_Hondele’s past year of commit activity - zavolab_pyutils Public
This repository contains python modules dedicated to various utilities for genomic data analysis, like library size normalization, annotation conversion etc
zavolanlab/zavolab_pyutils’s past year of commit activity - APA_localization Public
This repository is dedicated to lab's projects related to the studying of subcellular localization of alternative polyadenylation (APA) isoforms.
zavolanlab/APA_localization’s past year of commit activity - TemperatureDependentCelegansAging_Spang Public
This repository contains the computational workflows and downstream analysis notebooks related to the experiments on Temperature-Dependent C.elegans Aging conducted by the lab of Prof. Anne Spang.
zavolanlab/TemperatureDependentCelegansAging_Spang’s past year of commit activity - mirflowz Public
Snakemake workflow for the mapping and quantification of miRNAs and isomiRs from miRNA-Seq libraries.
zavolanlab/mirflowz’s past year of commit activity - ucsc_tracks Public
This repository is dedicated to store the tracks for visualization in UCSC Genome Browser, from various studies
zavolanlab/ucsc_tracks’s past year of commit activity
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